STRINGSTRING
cl9166_1 protein (Zea mays) - STRING interaction network
"cl9166_1" - LOC100283381 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl9166_1LOC100283381 (462 aa)    
Predicted Functional Partners:
ACC1
Acetyl-coenzyme A carboxylase (2325 aa)
       
      0.878
Zm.7590
Hypothetical protein LOC100193636 (2248 aa)
       
      0.878
Zm.85051
Acetyl CoA carboxylase Fragment (EC 6.4.1.2) (2325 aa)
       
      0.878
GRMZM2G556845_P01
Fimbrin-like protein 2 (677 aa)
       
  0.688
Zm.3539
Fimbrin-like protein 2 (704 aa)
       
  0.688
LIM6
Pollen-specific protein SF3 (198 aa)
       
  0.688
GRMZM2G081380_P02
Hypothetical protein LOC100382409 (695 aa)
       
  0.688
Zm.31053
Microtubule-associated protein futsch-like (1453 aa)
       
  0.688
Zm.23170
Fimbrin 1 (705 aa)
       
  0.688
Zm.94058
Uncharacterized protein (1156 aa)
       
 
  0.629
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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