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STRINGSTRING
zmm16 protein (Zea mays) - STRING interaction network
"zmm16" - Putative MADS-domain transcription factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmm16Putative MADS-domain transcription factor; Uncharacterized protein (209 aa)    
Predicted Functional Partners:
si1
MADS-box transcription factor 16; Silky1 (227 aa)
     
 
0.814
103645994
Floricaula/leafy-like 2 (394 aa)
       
 
  0.809
act1
Actin-1; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family (376 aa)
       
 
  0.808
GRMZM2G032070_P01
annotation not available (123 aa)
       
 
  0.797
542037
annotation not available (199 aa)
       
 
  0.794
zfl1
Zea floricaula/leafy1 (391 aa)
       
 
  0.774
ZCN15
ZCN15 (177 aa)
       
 
  0.727
103647221
annotation not available (358 aa)
           
  0.686
def2
Defensin-like protein 2 (121 aa)
           
  0.685
103629662
Protein UNUSUAL FLORAL ORGANS (436 aa)
       
 
  0.664
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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