STRINGSTRING
Zm.24813 protein (Zea mays) - STRING interaction network
"Zm.24813" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.24813Uncharacterized protein (638 aa)    
Predicted Functional Partners:
CCD8
Carotenoid cleavage dioxygenase (597 aa)
   
     
  0.672
GRMZM2G144273_P01
Putative uncharacterized protein (604 aa)
   
   
  0.630
sca1
Short chain alcohol dehydrogenase1 (283 aa)
           
  0.545
IDP1977
Hypothetical protein LOC100191697 (499 aa)
           
  0.545
Zm.22761
Uncharacterized protein (544 aa)
           
  0.545
Zm.67287
Zeaxanthin epoxidase ; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin (669 aa)
     
   
  0.544
TIDP2662
Hypothetical protein LOC100274367 (225 aa)
   
     
  0.538
Zm.83350
Proline oxidase (492 aa)
     
   
  0.467
Zm.39078
Hypothetical protein LOC100191769 (324 aa)
           
  0.465
abh1
Hypothetical protein LOC100383693 (470 aa)
           
  0.461
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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