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cl4742_1b protein (Zea mays) - STRING interaction network
"cl4742_1b" - Got1/Sft2-like vescicle transport protein family in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl4742_1bGot1/Sft2-like vescicle transport protein family; Golgi transport 1 protein B; Uncharacterized protein (140 aa)    
Predicted Functional Partners:
GRMZM2G367026_P01
Uridine 5’-monophosphate synthase (822 aa)
   
   
  0.888
GRMZM2G301172_P01
UMP synthase (267 aa)
   
   
  0.888
gpm370
Putative ADP-ribosylation factor GTPase-activating protein AGD11; Uncharacterized protein; Uridine 5-monophosphate synthase (1052 aa)
   
   
  0.888
GRMZM2G327427_P01
Dihydropyrimidinase (329 aa)
   
   
  0.887
100274212
Allantoinase (506 aa)
   
   
  0.887
pco084866
Dihydropyrimidinase (538 aa)
   
   
  0.887
103636016
Carbamoyl-phosphate synthase large chain chloroplastic (1174 aa)
   
   
  0.769
100273931
Carbamoyl-phosphate synthase small chain chloroplastic (446 aa)
   
   
  0.769
100282373
Aspartate carbamoyltransferase 1 isoform 1; Aspartate carbamoyltransferase 1 isoform 2; Uncharacterized protein ; Belongs to the ATCase/OTCase family (364 aa)
   
   
  0.769
100282482
Aspartate carbamoyltransferase 1 ; Belongs to the ATCase/OTCase family (369 aa)
   
   
  0.769
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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