STRINGSTRING
GRMZM2G111611_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G111611_P01" - Vesicle transport v-SNARE 13 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G111611_P01Vesicle transport v-SNARE 13 (221 aa)    
Predicted Functional Partners:
GRMZM2G115775_P01
Hypothetical protein LOC100217094 (275 aa)
     
  0.995
IDP2443
Hypothetical protein LOC100383665 (284 aa)
     
  0.993
GRMZM2G108087_P01
Putative uncharacterized protein (223 aa)
     
  0.993
GRMZM2G387076_P02
VAMP-like protein YKT62 (359 aa)
     
  0.992
IDP583
VAMP-like protein YKT62 (274 aa)
     
  0.992
TIDP3725
Hypothetical protein LOC100273880 (232 aa)
     
  0.980
GRMZM2G008638_P01
Syntaxin-61-like (232 aa)
     
  0.980
GRMZM2G162544_P01
Hypothetical protein LOC100191311 (320 aa)
     
  0.979
GRMZM2G051327_P01
Hypothetical protein LOC100192536 (323 aa)
     
  0.979
GRMZM2G098496_P01
Alpha-soluble NSF attachment protein (289 aa)
     
  0.979
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]