STRINGSTRING
pco133717 protein (Zea mays) - STRING interaction network
"pco133717" - ATP-dependent Clp protease proteolytic subunit in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco133717ATP-dependent Clp protease proteolytic subunit (395 aa)    
Predicted Functional Partners:
GRMZM5G861603_P01
ATP-dependent Clp protease ATP-binding subunit clpX (559 aa)
 
  0.892
GRMZM2G172829_P01
CLP protease regulatory subunit CLPX3 mitochondrial (624 aa)
 
  0.837
100272327
CLP protease regulatory subunit CLPX3 mitochondrial (346 aa)
 
  0.837
pco093235b
CLP protease regulatory subunit CLPX3 mitochondrial (643 aa)
 
  0.836
GRMZM2G331833_P03
CLP protease regulatory subunit CLPX1 mitochondrial (263 aa)
 
  0.836
pco104538
ATP-dependent Clp protease ATP-binding subunit clpA; Uncharacterized protein (239 aa)
     
 
  0.748
100281862
ATP-dependent Clp protease ATP-binding subunit clpA; Uncharacterized protein (230 aa)
     
 
  0.748
100502233
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (407 aa)
   
 
  0.740
100216648
Succinate dehydrogenase7; (Csu474(RpS14)), mRNA; Uncharacterized protein (350 aa)
   
 
  0.740
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
 
     
  0.723
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]