STRINGSTRING
pco070843 protein (Zea mays) - STRING interaction network
"pco070843" - LOC100285815 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco070843LOC100285815 (334 aa)    
Predicted Functional Partners:
GRMZM2G419969_P01
Hypothetical protein LOC100217212 (131 aa)
     
 
  0.902
Zm.19349
Phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase (551 aa)
         
  0.714
GRMZM2G405947_P01
Benzoate O-methyltransferase-like (285 aa)
           
  0.710
GRMZM2G143871_P01
Uncharacterized protein (335 aa)
           
  0.710
GRMZM2G133996_P01
Uncharacterized protein (376 aa)
           
  0.710
GRMZM2G050321_P01
Uncharacterized protein (387 aa)
           
  0.710
GRMZM2G357734_P03
Uncharacterized protein (638 aa)
   
   
  0.671
GRMZM2G444541_P04
30S ribosomal protein S15, chloroplastic (458 aa)
       
  0.623
GRMZM5G846394_P01
Annotation not available (75 aa)
   
   
  0.607
GRMZM5G832664_P01
Annotation not available (75 aa)
   
   
  0.607
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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