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PDE191 protein (Zea mays) - STRING interaction network
PDE191 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE191PDE191 (334 aa)    
Predicted Functional Partners:
GRMZM2G319109_P01
Uncharacterized LOC103630315 (794 aa)
         
  0.531
TIDP3406
LOC100285808 (362 aa)
     
   
  0.503
GRMZM2G033653_P01
Ribosomal protein S6 containing protein (310 aa)
     
   
  0.500
GRMZM2G142097_P02
50S ribosomal protein L18 (165 aa)
     
   
  0.490
pco086097
Hypothetical protein LOC100192861 (978 aa)
     
   
  0.463
GRMZM2G044684_P01
Protein grpE ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (328 aa)
     
        0.422
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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