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STRINGSTRING
542114 protein (Zea mays) - STRING interaction network
"542114" - Chloride channel in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
542114Chloride channel (813 aa)    
Predicted Functional Partners:
LPE1
Nucleobase-ascorbate transporter LPE1; High affinity uric acid-xanthine transporter in A.nidulans. Binds, but cannot transport ascorbic acid; Belongs to the xanthine/uracil permease family. Nucleobase-cation symporter-2 (NCS2) (TC 2.A.40) subfamily (527 aa)
     
 
  0.802
103634425
annotation not available (526 aa)
           
  0.800
100280481
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (222 aa)
         
  0.786
GRMZM2G581728_P01
annotation not available (527 aa)
           
  0.713
100283587
3-hydroxyisobutyrate dehydrogenase ; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (342 aa)
           
  0.713
103651283
annotation not available (723 aa)
     
   
  0.708
103650974
Sorting nexin 1 (398 aa)
     
   
  0.684
100194251
Sorting nexin 1 (367 aa)
     
   
  0.684
100281269
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (478 aa)
           
  0.635
pza03240
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (492 aa)
           
  0.635
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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