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STRINGSTRING
sbp13 protein (Zea mays) - STRING interaction network
"sbp13" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbp13annotation not available (99 aa)    
Predicted Functional Partners:
nactf33
NAC domain-containing protein 37; Secondary wall NAC transcription factor 5; Uncharacterized protein (362 aa)
           
  0.735
bHLH125
Transcription factor SPATULA; Putative HLH DNA-binding domain superfamily protein; Uncharacterized protein (312 aa)
           
  0.730
100273190
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane (160 aa)
           
  0.683
100273779
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane (301 aa)
           
  0.683
dcl101
Dicer-like 101; Belongs to the helicase family. Dicer subfamily (1307 aa)
           
  0.597
100304236
Regulator of nonsense transcripts 1-like protein (1273 aa)
           
  0.570
GRMZM2G102664_P01
annotation not available (526 aa)
           
  0.570
id1
Zinc finger protein ID1 (436 aa)
           
  0.567
bhlh29
Transcription factor bHLH63 (350 aa)
           
  0.564
cl44900_1
Uncharacterized protein (219 aa)
           
  0.563
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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