STRINGSTRING
yz1 protein (Zea mays) - STRING interaction network
"yz1" - YZ1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yz1YZ1 (407 aa)    
Predicted Functional Partners:
x1
Hypothetical protein LOC100279850 (628 aa)
           
  0.721
GRMZM2G001262_P01
Annotation not available (147 aa)
           
  0.721
TCP16
Transcription factor TCP21-like (220 aa)
           
  0.569
TCP11
Teosinte branched1 protein (240 aa)
           
  0.569
TCP7
Hypothetical protein LOC100194214 (275 aa)
           
  0.563
bhlh38
Putative HLH DNA-binding domain superfamily protein (241 aa)
           
  0.561
TCP14
Transcription factor PCF1-like (207 aa)
           
  0.556
wrky46
Probable WRKY transcription factor 14 (484 aa)
           
  0.530
AUX5
Hypothetical protein LOC100273821 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (355 aa)
           
  0.529
AUX1
IAA20 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (197 aa)
           
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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