STRINGSTRING
Zm.17519 protein (Zea mays) - STRING interaction network
"Zm.17519" - FIP1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.17519FIP1 (216 aa)    
Predicted Functional Partners:
GRMZM2G360677_P01
40S ribosomal protein S8 (221 aa)
           
  0.566
RPS8
40S ribosomal protein S8 (221 aa)
           
  0.566
Zm.123019
LGC1 (LOC100281001), mRNA (145 aa)
           
  0.525
Zm.92231
Putative Pti1-like kinase (368 aa)
           
  0.468
Zm.6197
Hypothetical protein LOC100191947 ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
           
  0.467
Zm.96357
60S ribosomal protein L31 (123 aa)
           
  0.463
TIDP3261
60S ribosomal protein L31 (124 aa)
           
  0.463
GRMZM2G011253_P01
60S ribosomal protein L31 (127 aa)
           
  0.463
GRMZM5G860824_P01
Branched-chain-amino-acid aminotransferase (EC 2.6.1.42) (364 aa)
           
  0.407
GRMZM2G442548_P01
Cactin-like (149 aa)
           
  0.407
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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