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STRINGSTRING
cl4224_1 protein (Zea mays) - STRING interaction network
"cl4224_1" - Ubiquitin-like domain-containing CTD phosphatase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl4224_1Ubiquitin-like domain-containing CTD phosphatase (348 aa)    
Predicted Functional Partners:
103652775
Phosphatidate phosphatase PAH2 (1215 aa)
     
 
  0.773
100279857
Phosphatidate phosphatase PAH1 (969 aa)
     
 
  0.773
103639350
Transcription activator (531 aa)
       
 
  0.597
pco081507
Transcription initiation factor IIF, alpha subunit (531 aa)
       
 
  0.597
100279221
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (813 aa)
     
 
  0.504
100282633
1-acylglycerol-3-phosphate O-acyltransferase; Abhydrolase domain-containing protein 5; Uncharacterized protein (488 aa)
           
  0.493
TIDP3728
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (415 aa)
     
   
  0.467
umc1962
Leucine-rich repeat (LRR) family protein (972 aa)
     
 
  0.465
103633122
annotation not available (542 aa)
           
  0.431
GRMZM2G180691_P01
Serine/threonine-protein phosphatase (307 aa)
     
 
  0.428
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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