STRINGSTRING
CenpcA protein (Zea mays) - STRING interaction network
"CenpcA" - CENPCA protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CenpcACENPCA protein (701 aa)    
Predicted Functional Partners:
cenH3
Centromeric histone H3 (157 aa)
     
   
  0.552
Ij
Protein Iojap ; May be a ribosome silencing factor (Potential). Involved in plastid biogenesis. Plastids affected by a mutation in Iojap lose the ability to perform translation and lack plastid ribosomes (228 aa)
           
  0.529
MYB123
R2R3MYB-domain protein Fragment (313 aa)
     
        0.522
GRMZM2G105750_P03
Hypothetical protein LOC100194273 (553 aa)
     
   
  0.495
MADS5
MADS box protein (255 aa)
     
        0.495
GRMZM2G461831_P01
Phosphoenolpyruvate carboxylase Fragment (179 aa)
     
        0.476
GRMZM2G328772_P01
AS-ZmSLR protein (54 aa)
     
        0.469
Zm.92942
R2R3MYB-domain protein Fragment (339 aa)
     
        0.468
Zm.287
Response regulator (148 aa)
     
        0.464
Zm.222
Cytokinin response regulator2 (159 aa)
     
        0.454
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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