STRINGSTRING
Zm.21946 protein (Zea mays) - STRING interaction network
"Zm.21946" - Proline-rich protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21946Proline-rich protein (220 aa)    
Predicted Functional Partners:
cl1298_1
LOC542000 (481 aa)
     
        0.495
LTP3
Nonspecific lipid-transfer protein (123 aa)
     
        0.460
Zm.540
Glutathione transferase9 (226 aa)
           
  0.416
GRMZM2G124974_P01
Glutathione S-transferase (213 aa)
           
  0.416
GRMZM2G096247_P01
LOC100282447 (226 aa)
           
  0.416
LOC542195
Bet v I allergen (154 aa)
     
        0.416
GRMZM2G092923_P01
LOC100280768 (290 aa)
           
  0.414
Zm.19094
Hypothetical protein LOC100279575 (LOC100279575), mRNA; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (345 aa)
     
        0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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