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STRINGSTRING
GRMZM2G114572_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G114572_P01" - Pentatricopeptide repeat-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G114572_P01Pentatricopeptide repeat-containing protein (582 aa)    
Predicted Functional Partners:
tdsgR47H12
Pentatricopeptide repeat-containing protein (610 aa)
           
  0.757
GRMZM2G147854_P01
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (451 aa)
       
 
  0.745
GRMZM2G444115_P01
PYK10-binding protein 2 (393 aa)
           
  0.540
100502388
MOB kinase activator-like 1B (218 aa)
           
  0.523
100216706
Mps one binder kinase activator-like 1A (215 aa)
           
  0.523
pld8
annotation not available (823 aa)
           
  0.489
103647321
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (839 aa)
           
  0.489
GRMZM2G441089_P01
annotation not available (270 aa)
           
  0.478
103630917
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (722 aa)
           
  0.403
100501678
annotation not available (1048 aa)
           
  0.403
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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