STRINGSTRING
cl25517_1b protein (Zea mays) - STRING interaction network
"cl25517_1b" - Non-specific serine/threonine protein kinase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl25517_1bNon-specific serine/threonine protein kinase (468 aa)    
Predicted Functional Partners:
100279316
Sucrose nonfermenting 4-like protein (448 aa)
       
 
  0.819
541867
AKINbetagamma-1 protein kinase (497 aa)
       
 
  0.819
100284094
SNF4 (452 aa)
       
 
  0.819
GRMZM2G014170_P01
Sucrose nonfermenting 4-like protein (496 aa)
       
 
  0.819
103643331
annotation not available (596 aa)
     
 
  0.771
gpm775
Phosphoglucan phosphatase DSP4 chloroplastic; RIP1; Uncharacterized protein (373 aa)
     
 
  0.771
grf2
General regulatory factor2; 14-3-3-like protein GF14-12 ; Belongs to the 14-3-3 family (900 aa)
     
 
  0.556
GRMZM2G358667_P01
Uncharacterized protein (181 aa)
       
 
  0.540
100279221
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (813 aa)
     
 
  0.521
GRMZM2G424582_P01
E3 ubiquitin-protein ligase KEG (1681 aa)
       
 
0.504
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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