STRINGSTRING
tac905.47 protein (Zea mays) - STRING interaction network
"tac905.47" - GDP-mannose 4,6 dehydratase 2 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tac905.47GDP-mannose 4,6 dehydratase 2 (371 aa)    
Predicted Functional Partners:
Zm.81383
GDP-L-fucose synthase 1 (376 aa)
 
  0.996
gpm480
Hypothetical protein LOC100280325 (371 aa)
   
  0.977
IDP512
Hypothetical protein LOC100192102 (380 aa)
   
  0.977
GRMZM2G160506_P01
Hypothetical protein LOC100274383 (361 aa)
   
 
  0.962
AY110569
Hypothetical protein LOC100274471 (361 aa)
   
 
  0.962
GRMZM2G178254_P01
Hypothetical protein LOC100191571 (415 aa)
   
 
  0.962
GRMZM2G049484_P01
Beta-1,4-mannosyltransferase (472 aa)
   
 
  0.897
cl40696_1
Hypothetical protein LOC100272978 (36 aa)
   
 
  0.894
GRMZM2G067964_P01
Hypothetical protein LOC100194221 (178 aa)
         
    0.800
GRMZM2G300634_P02
Annotation not available (525 aa)
   
  0.781
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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