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STRINGSTRING
cl7385_1 protein (Zea mays) - STRING interaction network
"cl7385_1" - Oligoribonuclease in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl7385_1Oligoribonuclease (249 aa)    
Predicted Functional Partners:
pco076082
H/ACA ribonucleoprotein complex subunit 2; Uncharacterized protein (149 aa)
     
   
  0.953
GRMZM2G585025_P02
Small RNA degrading nuclease 5 (399 aa)
   
  0.937
100383366
Small RNA degrading nuclease 5 (552 aa)
   
  0.937
GRMZM2G082097_P01
annotation not available (527 aa)
   
  0.937
GRMZM2G098305_P01
Nucleic acid-binding OB-fold-like protein; Single-stranded DNA-binding protein; Uncharacterized protein (224 aa)
   
      0.894
100274237
Uncharacterized protein (223 aa)
   
      0.894
100285351
Mitochondrial import inner membrane translocase subunit Tim13; Uncharacterized protein ; Belongs to the small Tim family (87 aa)
     
        0.837
100217212
Multifunctional methyltransferase subunit TRM112-like protein (131 aa)
     
        0.836
GRMZM2G477632_P01
annotation not available (115 aa)
     
        0.832
rpl10
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (231 aa)
     
        0.832
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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