STRINGSTRING
Zm.92538 protein (Zea mays) - STRING interaction network
"Zm.92538" - LOC100282031 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.92538LOC100282031 (148 aa)    
Predicted Functional Partners:
GRMZM2G327680_P01
Uncharacterized protein (380 aa)
       
      0.889
pco076481
Hypothetical protein LOC100280067 (798 aa)
       
 
  0.849
AKHSDH2
Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic Precursor (AK-HSDH 2)(AK-HD 2) [Includes Aspartokinase(EC 2.7.2.4);Homoserine dehydrogenase(EC 1.1.1.3)] (917 aa)
       
 
  0.849
GRMZM2G455751_P01
Annotation not available (588 aa)
     
 
  0.767
GRMZM2G344073_P01
Annotation not available (329 aa)
     
 
  0.767
GRMZM2G073336_P01
Annotation not available (350 aa)
     
 
  0.767
Zm.2168
Deoxyuridine 5’-triphosphate nucleotidohydrolase (222 aa)
     
      0.717
GRMZM5G822426_P02
Hypothetical protein LOC100193843 (459 aa)
     
 
  0.704
GRMZM2G443256_P01
SMAD/FHA domain-containing family protein (710 aa)
     
  0.703
AC233850.1_FGP008
Annotation not available (669 aa)
     
  0.703
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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