STRINGSTRING
Zm.95956 protein (Zea mays) - STRING interaction network
"Zm.95956" - Protein kri1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.95956Protein kri1 (638 aa)    
Predicted Functional Partners:
Zm.12340
Hypothetical protein LOC100383975 (LOC100383975), mRNA; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (391 aa)
     
 
  0.999
GRMZM2G330519_P01
Uncharacterized protein (153 aa)
     
      0.998
GRMZM2G168171_P01
Uncharacterized protein (183 aa)
     
      0.998
Zm.146985
Protein BFR2-like (175 aa)
     
      0.998
Zm.85437
Protein AATF (289 aa)
     
      0.998
GRMZM2G006526_P01
Protein AATF-like (102 aa)
     
      0.998
Zm.67093
Nucleolar protein 14 (921 aa)
     
 
  0.998
GRMZM2G005308_P01
Hypothetical protein LOC100194088 ; Involved in nucleolar processing of pre-18S ribosomal RNA (539 aa)
     
      0.998
GRMZM2G457705_P01
Annotation not available (190 aa)
     
      0.995
GRMZM2G405499_P01
Uncharacterized protein (539 aa)
     
      0.995
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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