STRINGSTRING
abp1 protein (Zea mays) - STRING interaction network
"abp1" - Auxin-binding protein 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
abp1Auxin-binding protein 1; Receptor for the plant hormone auxin (201 aa)    
Predicted Functional Partners:
rop6
Putative Rop family GTPase, ROP6; Belongs to the small GTPase superfamily. Rho family (212 aa)
           
  0.731
103627470
annotation not available (255 aa)
       
 
  0.728
GRMZM2G078526_P01
E3 ubiquitin-protein ligase RMA1; Ring domain containing protein; Uncharacterized protein (261 aa)
       
 
  0.728
GRMZM2G040803_P01
E3 ubiquitin-protein ligase RMA1; Putative RING zinc finger domain superfamily protein isoform 1; Putative RING zinc finger domain superfamily protein isoform 2; Uncharacterized protein (261 aa)
       
 
  0.728
tdsgR01C05
Wiscott-Aldrich syndrome, C-terminal (187 aa)
           
  0.713
GRMZM2G373322_P01
annotation not available (549 aa)
       
 
  0.706
103625941
annotation not available (958 aa)
       
 
  0.706
103643907
annotation not available (962 aa)
       
 
  0.706
100192365
Putative leucine-rich repeat protein kinase; Receptor protein kinase TMK1; Uncharacterized protein (958 aa)
       
 
  0.706
rop2
Rho-related protein from plants2; Putative ROP family GTPase ROP2; Rac-like GTP-binding protein 6; Rho protein from plants2; Rop2 small GTP binding protein; Uncharacterized protein ; Belongs to the small GTPase superfamily. Rho family (197 aa)
           
  0.688
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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