STRINGSTRING
gpm19 protein (Zea mays) - STRING interaction network
"gpm19" - Hypothetical protein LOC100280322 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm19Hypothetical protein LOC100280322 (433 aa)    
Predicted Functional Partners:
GRMZM2G546452_P02
Autophagy-related protein 18h-like (381 aa)
     
      0.883
GRMZM2G116700_P01
Uncharacterized protein (865 aa)
     
      0.883
Zm.72592
Autophagy-related protein 18h-like (1568 aa)
     
      0.883
CAD
Probable cinnamyl alcohol dehydrogenase (CAD)(EC 1.1.1.195)(Brown-midrib 1 protein); Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol (367 aa)
     
      0.467
Zm.32283
Mannitol dehydrogenase (432 aa)
     
      0.466
GRMZM2G090980_P01
Hypothetical protein LOC100192586 (354 aa)
     
      0.466
GRMZM2G700188_P05
Hypothetical protein LOC100273263 (415 aa)
       
      0.465
GRMZM2G457895_P01
Annotation not available (454 aa)
       
      0.465
GRMZM2G395357_P01
Annotation not available (132 aa)
       
      0.465
Zm.24928
Hypothetical protein LOC100216819 (361 aa)
       
      0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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