• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100274505 protein (Zea mays) - STRING interaction network
"100274505" - Rhomboid-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100274505Rhomboid-like protein (324 aa)    
Predicted Functional Partners:
103630559
TraB protein (422 aa)
         
  0.689
GRMZM2G173833_P01
Cytochrome c oxidase subunit II (510 aa)
           
  0.681
100283596
Rhomboid family protein (273 aa)
   
     
  0.556
100281274
39S ribosomal protein L47 isoform 1; 39S ribosomal protein L47 isoform 2; Uncharacterized protein (138 aa)
     
        0.550
GRMZM2G073959_P01
RHOMBOID-like protein 12 mitochondrial (328 aa)
     
   
  0.531
toc34
Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (326 aa)
           
  0.482
pza02939
Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family (314 aa)
     
   
  0.476
100216684
RHOMBOID-like protein 13; Putative Rhomboid family protein; Rhomboid family protein; Uncharacterized protein (275 aa)
           
  0.472
100193065
Putative zinc metalloprotease EGY2 chloroplastic (549 aa)
   
   
  0.464
pco089119
Rhomboid-like protein 15 (396 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]