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STRINGSTRING
gpm293 protein (Zea mays) - STRING interaction network
"gpm293" - Putative axial regulator YABBY 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm293Putative axial regulator YABBY 2 (216 aa)    
Predicted Functional Partners:
kan3
KANADI3; Kanadi3; Uncharacterized protein (468 aa)
           
  0.688
LBD6
LOB domain-containing protein 6; Promotes the switch from proliferation to differentiation in the embryo sac. Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Interacts directly with RS2 (rough sheath 2) to repress some knox homeobox genes (260 aa)
           
  0.621
100502477
Putative MYB DNA-binding domain superfamily protein (357 aa)
           
  0.595
100281529
KANADI-like transcription factor FEATHERED; Putative MYB DNA-binding domain superfamily protein (356 aa)
           
  0.595
100384098
Putative MYB DNA-binding domain superfamily protein (372 aa)
           
  0.595
GLK47
Putative transcription factor KAN2 (380 aa)
           
  0.595
IDP681
C2C2-YABBY-transcription factor 6 (192 aa)
     
   
0.560
ARF4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (936 aa)
           
  0.560
PHD3
PHD transcription factor; SHL1 (219 aa)
           
  0.537
ago5b
Argonaute5b; Belongs to the argonaute family (1013 aa)
           
  0.537
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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