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STRINGSTRING
ipt6 protein (Zea mays) - STRING interaction network
"ipt6" - Isopentenyl transferase IPT6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipt6Isopentenyl transferase IPT6 (338 aa)    
Predicted Functional Partners:
pco067553
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Uncharacterized protein (462 aa)
     
  0.889
fps1
Farnesyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (350 aa)
     
  0.778
fps2
Farnesyl diphosphate synthase2; Belongs to the FPP/GGPP synthase family (355 aa)
     
  0.778
100273420
Farnesyl diphosphate synthase3; Belongs to the FPP/GGPP synthase family (355 aa)
     
  0.778
GRMZM2G076936_P01
Cytokinin hydroxylase; Putative cytochrome P450 superfamily protein; Uncharacterized protein (418 aa)
         
  0.776
100501848
Cytokinin hydroxylase (527 aa)
         
  0.776
ckx9
Cytokinin oxidase9 (568 aa)
           
  0.682
CKX8
Cytokinin dehydrogenase 8; Uncharacterized protein (539 aa)
           
  0.680
GRMZM2G483889_P01
annotation not available (304 aa)
     
  0.655
ggps2
Putative geranylgeranyl pyrophosphate synthase 2 ; Belongs to the FPP/GGPP synthase family (441 aa)
     
  0.655
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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