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Zm.36547 protein (Zea mays) - STRING interaction network
"Zm.36547" - OB-fold nucleic acid binding domain containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.36547OB-fold nucleic acid binding domain containing protein (165 aa)    
Predicted Functional Partners:
AC225555.3_FGP005
Uncharacterized protein (374 aa)
       
 
  0.929
TERT
Telomerase reverse transcriptase catalytic subunit (1188 aa)
       
 
  0.683
GRMZM5G857930_P05
Hypothetical protein LOC100273602 (482 aa)
       
 
  0.636
pco136451a
Hypothetical protein LOC100273977 (481 aa)
       
 
  0.636
Zm.155493
Uncharacterized protein (579 aa)
           
  0.457
Zm.71664
Hypothetical protein LOC100384182 (LOC100384182), mRNA (575 aa)
           
  0.457
pza01623
Putative uncharacterized protein (583 aa)
           
  0.457
SMH5
Single myb histone 5 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (286 aa)
           
  0.414
SMH1
Hypothetical protein LOC100274000 ; Binds preferentially double-stranded telomeric repeats 5’-TTTAGGG-3’, but can also bind to the single G-rich and C-rich telomeric strand (299 aa)
           
  0.414
SMH6
Single myb histone 6 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (317 aa)
           
  0.414
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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