STRINGSTRING
Zm.38616 protein (Zea mays) - STRING interaction network
"Zm.38616" - Defence-related protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.38616Defence-related protein (inra2(prp)), mRNA (219 aa)    
Predicted Functional Partners:
STY2
Salt-inducible protein kinase (1221 aa)
           
  0.570
Zm.13244
Serine acetyltransferase2 (314 aa)
           
  0.559
Zm.126244
NHL25 (265 aa)
           
  0.526
NHL25
Hypothetical protein LOC100383182 (274 aa)
           
  0.526
CNR8
Hypothetical protein LOC100194102 (676 aa)
           
  0.463
AC194100.2_FGP001
Annotation not available (884 aa)
           
  0.410
GRMZM2G141456_P01
Hypothetical protein LOC100191620 (454 aa)
       
  0.400
GRMZM2G090441_P01
Hypothetical protein LOC100383770 (484 aa)
       
  0.400
AC211652.4_FGP003
Hypothetical protein LOC100191620 (454 aa)
       
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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