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STRINGSTRING
cl41895_1b protein (Zea mays) - STRING interaction network
"cl41895_1b" - Calcium ion binding in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl41895_1bCalcium ion binding (500 aa)    
Predicted Functional Partners:
100304257
Rhamnogalacturonate lyase family protein (573 aa)
           
  0.698
GRMZM2G328309_P01
annotation not available (693 aa)
           
  0.597
crs1
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Required for the splicing of group IIA introns in chloroplasts, and especially for atpF, by regulating the intron folding. Forms splicing particles with RNA. Also involved in chloroplast protein translation (715 aa)
           
  0.597
103631988
annotation not available (880 aa)
           
  0.543
103646467
annotation not available (639 aa)
           
  0.516
103650047
annotation not available (613 aa)
           
  0.467
100382085
Calcium ion binding (392 aa)
           
  0.457
100193408
Calcium ion binding (398 aa)
           
  0.457
GRMZM2G071628_P01
annotation not available (89 aa)
           
  0.457
pza00497
Growth regulator like protein (500 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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