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STRINGSTRING
gpm725 protein (Zea mays) - STRING interaction network
"gpm725" - Carbon catabolite repressor protein 4 homolog 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm725Carbon catabolite repressor protein 4 homolog 1 (605 aa)    
Predicted Functional Partners:
GRMZM2G340749_P01
Transcription regulator NOT2/NOT3/NOT5 family protein (777 aa)
       
 
  0.881
GRMZM2G100246_P01
Transcription regulator NOT2/NOT3/NOT5 family protein (302 aa)
       
 
  0.881
AC197122.3_FGP003
annotation not available (591 aa)
       
 
  0.881
GRMZM2G481210_P01
annotation not available (383 aa)
     
 
  0.870
GRMZM2G383215_P01
Uncharacterized protein (280 aa)
       
 
  0.869
GRMZM2G457909_P01
annotation not available (325 aa)
     
 
  0.869
GRMZM2G082573_P01
annotation not available (284 aa)
     
 
  0.869
GRMZM2G347270_P01
annotation not available (467 aa)
     
 
  0.868
100381661
Putative NOT transcription complex subunit VIP2 (616 aa)
     
 
  0.868
100281429
Putative NOT transcription complex subunit VIP2 (624 aa)
     
 
  0.868
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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