STRINGSTRING
Zm.136487 protein (Zea mays) - STRING interaction network
"Zm.136487" - LOC100283256 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.136487LOC100283256 (177 aa)    
Predicted Functional Partners:
wrky51
Probable WRKY transcription factor 42 (559 aa)
           
  0.530
IDP182
LOC100281414 (871 aa)
           
  0.530
Zm.161779
LOC100285769 (112 aa)
           
  0.523
RPL30
60S ribosomal protein L30 (112 aa)
           
  0.468
GATA6
Hypothetical protein LOC100275354 (438 aa)
           
  0.467
gata2
GATA transcription factor 22 (139 aa)
           
  0.459
cl2748_2
Hypothetical protein LOC100382448 (750 aa)
           
  0.459
GRMZM2G142068_P01
Inactive protein kinase SELMODRAFT_444075-like (828 aa)
           
  0.459
Zm.10456
Hypothetical protein LOC100277504 (222 aa)
           
  0.459
Zm.47551
USP family protein (261 aa)
     
   
  0.418
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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