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STRINGSTRING
cl22611_1 protein (Zea mays) - STRING interaction network
"cl22611_1" - Remorin family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl22611_1Remorin family protein (521 aa)    
Predicted Functional Partners:
100170245
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (313 aa)
           
  0.899
umc2770
GMP synthase [glutamine-hydrolyzing] (545 aa)
           
  0.880
100383118
Putative peptidyl-prolyl cis-trans isomerase and WD40 repeat domain family protein (615 aa)
           
  0.873
tdsgR78G10
ABC transporter G family member 26; ABC transporter-like protein; Uncharacterized protein (663 aa)
           
  0.598
cl28132_1
Rhodanese-like domain-containing protein 7 (453 aa)
           
  0.588
103654538
Uncharacterized protein (583 aa)
           
  0.588
cenH3
Centromeric histone H3 isoform 1; Centromeric histone H3 isoform 2; Uncharacterized protein (157 aa)
     
   
  0.543
crd101
Chromdomain-containing protein CRD101; Uncharacterized protein (380 aa)
           
  0.541
ccs1
C-type cytochrome synthesis protein1 (549 aa)
           
  0.539
GRMZM2G439448_P01
annotation not available (85 aa)
           
  0.501
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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