STRINGSTRING
Zm.4554 protein (Zea mays) - STRING interaction network
"Zm.4554" - LOC100283321 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4554LOC100283321 (405 aa)    
Predicted Functional Partners:
GRMZM2G060451_P01
LOC100281725 (761 aa)
     
 
  0.959
Zm.98237
Hypothetical protein LOC100381681 (315 aa)
     
 
  0.953
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
   
 
  0.801
Zm.18394
ATP-dependent Clp protease ATP-binding subunit clpX (559 aa)
     
 
  0.799
GRMZM2G331833_P03
Hypothetical protein LOC100272778 (263 aa)
     
 
  0.799
GRMZM2G172829_P01
Hypothetical protein LOC100383734 (624 aa)
     
 
  0.799
pco093235b
Hypothetical protein LOC100272848 (643 aa)
     
 
  0.799
Zm.84164
Hypothetical protein LOC100272327 (346 aa)
     
 
  0.799
GRMZM5G820287_P02
Uncharacterized protein (670 aa)
   
   
  0.725
GRMZM2G177224_P02
Cell division protein FtsZ homolog 2-1, chloroplastic-like (470 aa)
   
 
0.704
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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