STRINGSTRING
wrky48 protein (Zea mays) - STRING interaction network
"wrky48" - Hypothetical protein LOC100279570 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wrky48Hypothetical protein LOC100279570 (396 aa)    
Predicted Functional Partners:
Zm.11891
Helix-loop-helix DNA-binding domain containing protein (299 aa)
     
        0.774
Zm.79558
LOC100279301 (TIDP2949), mRNA (555 aa)
     
   
0.621
GRMZM2G323024_P01
Hypothetical protein LOC100382191 (1379 aa)
       
 
  0.586
Zm.139729
Calcium dependent protein kinase (547 aa)
     
        0.555
pco145234
LOC100283680 (357 aa)
     
        0.512
LOC542202
Senescence-associated protein DH (273 aa)
     
        0.511
wrky83
WRKY53 - superfamily of TFs having WRKY and zinc finger domains (489 aa)
     
   
0.504
WRKY92
WRKY53 - superfamily of TFs having WRKY and zinc finger domains (498 aa)
     
   
0.503
GRMZM2G153683_P02
Hypothetical protein LOC100217287 (295 aa)
     
        0.494
ACS47
Acc synthase (485 aa)
     
   
  0.491
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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