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GRMZM2G121269_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G121269_P01" - Ribosomal RNA small subunit methyltransferase chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G121269_P01Ribosomal RNA small subunit methyltransferase chloroplastic (287 aa)    
Predicted Functional Partners:
GRMZM2G310465_P01
annotation not available (514 aa)
     
 
  0.871
GRMZM2G320497_P01
Elongation factor 1-gamma 2 (414 aa)
     
 
  0.864
100284862
Elongation factor 1-gamma 2 (414 aa)
     
 
  0.864
100192872
Elongation factor gamma1 (417 aa)
     
 
  0.864
100282446
Elongation factor 1-gamma 3 (417 aa)
     
 
  0.864
100381466
Putative elongation factor 1-gamma 2 (414 aa)
     
 
  0.864
GRMZM5G854036_P01
annotation not available (127 aa)
       
 
  0.860
GRMZM2G311883_P01
annotation not available (224 aa)
       
 
  0.860
cdo98b
annotation not available (910 aa)
       
 
  0.860
GRMZM2G083689_P01
Nuclear cap-binding protein subunit 1 (866 aa)
     
 
  0.851
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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