STRINGSTRING
pgr5 protein (Zea mays) - STRING interaction network
"pgr5" - Pgr5 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgr5Pgr5 protein (127 aa)    
Predicted Functional Partners:
Zm.8898
Serine/threonine-protein kinase SNT7 (562 aa)
     
   
  0.707
GRMZM2G464328_P01
Hypothetical protein LOC100273248 (271 aa)
     
        0.670
Zm.92692
Photosystem II 22 kDa protein (272 aa)
     
   
  0.638
Zm.14399
ABCF-type protein (705 aa)
     
        0.620
RCA1
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic Precursor (RuBisCO activase)(RA); Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure (433 aa)
     
        0.602
Z477F24.15
Ferredoxin (150 aa)
     
 
  0.592
GRMZM2G071450_P01
Plastocyanin ; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (155 aa)
     
   
  0.583
petB
Cytochrome b6 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (232 aa)
       
 
  0.572
Zm.27135
Uncharacterized LOC103631990 (340 aa)
     
        0.570
vde1
Violaxanthin de-epoxidase (446 aa)
     
   
  0.564
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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