STRINGSTRING
cah1 protein (Zea mays) - STRING interaction network
"cah1" - Carbonic anhydrase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cah1Carbonic anhydrase (456 aa)    
Predicted Functional Partners:
pep1
Phosphoenolpyruvate carboxylase 1; Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (970 aa)
   
   
  0.864
mdh6
Malate dehydrogenase [NADP], chloroplastic; The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (432 aa)
   
   
  0.815
cl3683_1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide (166 aa)
   
 
  0.814
pdk1
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family (708 aa)
           
  0.778
tdsgR03C06
Protein DETOXIFICATION; Antiporter/ drug transporter/ transporter ; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (532 aa)
       
 
  0.720
GRMZM2G082097_P01
annotation not available (527 aa)
     
 
  0.664
pep7
Phosphoenolpyruvate carboxylase (960 aa)
         
  0.653
AY112199
4-methyl-5-thiazole monophosphate biosynthesis protein (428 aa)
           
  0.637
GRMZM2G102811_P01
Uncharacterized protein (391 aa)
           
  0.637
ssu1
Ribulose bisphosphate carboxylase small chain, chloroplastic; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity) (170 aa)
   
 
  0.635
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]