STRINGSTRING
Zm.85411 protein (Zea mays) - STRING interaction network
"Zm.85411" - Pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.85411Pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like (890 aa)    
Predicted Functional Partners:
GRMZM2G116526_P01
Uncharacterized LOC103643502 (327 aa)
     
   
  0.667
Zm.31454
Hypothetical protein LOC100275546 (555 aa)
     
   
  0.572
GRMZM2G103843_P01
Uncharacterized LOC103643674 (656 aa)
     
   
  0.542
Zm.84924
Pentatricopeptide repeat-containing protein At3g59040-like (600 aa)
     
     
0.536
GRMZM2G466780_P01
Protein kinase (521 aa)
     
   
  0.509
Zm.93751
Hypothetical protein LOC100273953 (LOC100273953), mRNA (348 aa)
     
   
  0.505
Zm.21536
SURF1 (344 aa)
     
   
  0.497
GRMZM2G009070_P01
Hypothetical protein LOC100273534 (760 aa)
     
   
  0.472
GRMZM2G091419_P01
Hypothetical protein LOC100382312 (656 aa)
     
   
  0.471
GRMZM2G052457_P01
Uncharacterized protein (434 aa)
       
 
  0.467
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (14%) [HD]