STRINGSTRING
pco085619 protein (Zea mays) - STRING interaction network
"pco085619" - LOC100284752 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco085619LOC100284752 (573 aa)    
Predicted Functional Partners:
csu3
Hypothetical protein LOC100276728 (LOC100276728), mRNA (245 aa)
       
      0.855
Zm.67671
Hypothetical protein LOC100275635 (373 aa)
           
  0.721
GRMZM2G091503_P01
Signal recognition particle receptor beta subunit (256 aa)
           
  0.721
GRMZM2G007871_P01
Uncharacterized protein (513 aa)
           
  0.721
GRMZM2G050890_P01
Prenylated rab acceptor family protein (193 aa)
       
      0.692
THX20
Hypothetical protein LOC100279784 (672 aa)
           
  0.569
Zm.28944
Hypothetical protein LOC100276155 (174 aa)
           
  0.569
Zm.7649
LOC100285821 (415 aa)
           
  0.569
WRKY116
Hypothetical protein LOC100382344 (610 aa)
           
  0.569
NAC38
NAC domain-containing protein 55-like (445 aa)
           
  0.569
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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