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STRINGSTRING
gpm920 protein (Zea mays) - STRING interaction network
"gpm920" - Pentatricopeptide repeat-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm920Pentatricopeptide repeat-containing protein (886 aa)    
Predicted Functional Partners:
TERT
Telomerase reverse transcriptase catalytic subunit variant (1188 aa)
           
  0.861
GRMZM2G350319_P01
Pentatricopeptide repeat-containing protein (626 aa)
           
  0.597
GRMZM2G320041_P01
Uncharacterized protein (453 aa)
           
  0.532
100272948
Pentatricopeptide repeat-containing protein (525 aa)
           
  0.532
100273602
Protection of telomeres 1a family protein; Protection of telomeres 1b protein; Uncharacterized protein (482 aa)
           
  0.505
pco136451a
Protection of telomeres 1a protein; Uncharacterized protein (481 aa)
           
  0.505
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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