STRINGSTRING
Zm.163639 protein (Zea mays) - STRING interaction network
"Zm.163639" - OCL4 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.163639OCL4 protein (884 aa)    
Predicted Functional Partners:
GRMZM2G027378_P01
Putative uncharacterized proteinUbiquitin-conjugating enzyme spm2 ; (148 aa)
           
  0.721
Zm.96997
DNA binding protein (135 aa)
           
  0.710
Zm.79642
C2H2 zinc-finger protein Fragment (522 aa)
           
  0.620
GRMZM2G447447_P01
Uncharacterized protein (1293 aa)
     
   
  0.583
Zm.15823
Putative uncharacterized protein (641 aa)
           
  0.565
Zm.35420
TPD1 (178 aa)
           
  0.564
cl36914_1
LOC100281604 (362 aa)
           
  0.529
Zm.23980
Pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like (956 aa)
           
  0.529
Zm.44689
Lethal embryo mutant1 (224 aa)
           
  0.529
TCP20
Hypothetical protein LOC100274570 (315 aa)
           
  0.520
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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