STRINGSTRING
pco100700a protein (Zea mays) - STRING interaction network
"pco100700a" - LOC100282806 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco100700aLOC100282806 (286 aa)    
Predicted Functional Partners:
GRMZM2G057642_P03
Hypothetical protein LOC100303796 (329 aa)
   
          0.503
GRMZM2G092493_P01
RNA-binding protein 38-like (284 aa)
   
          0.497
GRMZM2G180639_P01
Hypothetical protein LOC100279322 (279 aa)
   
          0.483
WHY1
LOC100170235 ; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs (266 aa)
           
  0.452
GRMZM2G108919_P01
Polyadenylate-binding protein 2 (212 aa)
   
          0.422
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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