STRINGSTRING
pco085164 protein (Zea mays) - STRING interaction network
"pco085164" - LOC100286188 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco085164LOC100286188 (246 aa)    
Predicted Functional Partners:
GRMZM2G178917_P01
Cyclopropane fatty acid synthase (877 aa)
 
        0.630
GRMZM2G079805_P01
Uncharacterized LOC103643302 (873 aa)
   
        0.551
GRMZM2G171716_P01
Hypothetical protein LOC100273145 (321 aa)
              0.448
csu10a
Hypothetical protein LOC100304216 (293 aa)
              0.448
GRMZM2G011314_P01
Hypothetical protein LOC100191340 (234 aa)
              0.448
GRMZM2G052821_P01
Hypothetical protein LOC100280217 (548 aa)
   
        0.439
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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