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phyB1 protein (Zea mays) - STRING interaction network
"phyB1" - Hypothetical protein LOC100383702 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phyB1Hypothetical protein LOC100383702 ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1161 aa)    
Predicted Functional Partners:
bHLH65
Hypothetical protein LOC100279991 (638 aa)
       
  0.972
bHLH68
Hypothetical protein LOC100382453 (567 aa)
       
  0.970
pco135758
Hypothetical protein LOC100383534 (756 aa)
       
  0.923
bZIP61
LOC100286123 (170 aa)
       
 
  0.859
PIL5
PIL5 (562 aa)
       
 
  0.844
GRMZM2G095727_P05
Hypothetical protein LOC100280240 (766 aa)
       
 
  0.814
Zm.29366
Uncharacterized protein (657 aa)
       
 
  0.814
Zm.9848
Two-component response regulator-like PRR37 (563 aa)
       
 
  0.814
Zm.6794
Putative uncharacterized protein (523 aa)
       
 
  0.813
GRMZM2G172152_P01
Hypothetical protein LOC100277533 (654 aa)
       
 
  0.808
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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