STRINGSTRING
umc2228 protein (Zea mays) - STRING interaction network
"umc2228" - LOC100283474 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2228LOC100283474 (200 aa)    
Predicted Functional Partners:
umc2111
LOC100282844 (207 aa)
     
        0.745
GRMZM2G178486_P01
Zinc finger, C3HC4 type family protein (115 aa)
     
        0.730
pco139734
Hypothetical protein LOC100274054 (416 aa)
     
        0.716
CesA12
Cellulose synthase catalytic subunit 12 (1056 aa)
     
        0.678
GRMZM2G365319_P01
ATP binding protein (595 aa)
     
        0.669
GRMZM2G037413_P03
Cellulose synthase 11 (1007 aa)
     
        0.641
TUBB3
Tubulin beta-3 chain (Beta-3-tubulin); Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
        0.617
rop5
Rho-related protein from plants 5 (215 aa)
     
        0.577
cesa10
LOC100284181 (1395 aa)
     
        0.512
Zm.11904
Disease resistance response protein 206 (166 aa)
     
        0.469
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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