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STRINGSTRING
100382990 protein (Zea mays) - STRING interaction network
"100382990" - RNA-binding (RRM/RBD/RNP motifs) family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100382990RNA-binding (RRM/RBD/RNP motifs) family protein (231 aa)    
Predicted Functional Partners:
100273079
Phosphatidylinositolglycan synthase family protein (302 aa)
           
  0.870
100194272
Serine/arginine-rich splicing factor SR45a (315 aa)
   
 
  0.824
103627429
annotation not available (752 aa)
           
  0.800
rs55622338
Hsp70-Hsp90 organizing protein 3 (580 aa)
     
        0.785
100274783
Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (202 aa)
           
  0.761
100278742
Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 (204 aa)
           
  0.761
100194058
Pre-mRNA processing ribonucleoprotein binding region-containing protein (485 aa)
     
   
  0.722
541780
Chaperone protein ClpB1; Heat-shock protein 101; Uncharacterized protein ; Belongs to the ClpA/ClpB family (912 aa)
     
        0.681
GRMZM2G125378_P01
Uncharacterized protein (52 aa)
     
   
  0.618
GRMZM2G442244_P01
Pentatricopeptide repeat-containing protein mitochondrial (794 aa)
       
 
  0.616
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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