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STRINGSTRING
SBP23 protein (Zea mays) - STRING interaction network
"SBP23" - Squamosa promoter-binding-like protein 15 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBP23Squamosa promoter-binding-like protein 15 (383 aa)    
Predicted Functional Partners:
100304327
Argonaute1c; Belongs to the argonaute family (1078 aa)
           
  0.730
100191731
MYBGA transcription factor; Transcription factor GAMYB; Uncharacterized protein (559 aa)
           
  0.687
IDP322
Homeobox-leucine zipper protein ATHB-14 (513 aa)
           
  0.621
hb124
annotation not available (174 aa)
           
  0.621
tdsgR07E06
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (315 aa)
           
  0.581
sod9
Superoxide dismutase [Cu-Zn] 4AP; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (152 aa)
           
  0.569
100284792
SURP and G-patch domain-containing protein 1-like protein (419 aa)
           
  0.560
pco067235
Cupredoxin superfamily protein; Copper ion binding protein; Uncharacterized protein (180 aa)
           
  0.560
TIDP2780
LOL1; LOL1 isoform 1; LOL1 isoform 2 (198 aa)
           
  0.538
cl340_1
Carbon catabolite repressor protein 4 homolog 4 (438 aa)
           
  0.516
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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