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STRINGSTRING
GRMZM2G126177_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G126177_P01" - annotation not available in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G126177_P01annotation not available (558 aa)    
Predicted Functional Partners:
rps19
30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
 
  0.960
GRMZM2G055567_P01
Putative DNA-directed RNA polymerase family protein (474 aa)
   
   
  0.960
rpoC1
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the RNA polymerase beta’ chain family. RpoC1 subfamily (683 aa)
     
   
  0.946
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
 
 
  0.939
atpI
ATP synthase subunit a, chloroplastic; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (247 aa)
 
   
  0.901
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit (36 aa)
     
   
  0.890
GRMZM2G418135_P01
annotation not available (196 aa)
 
 
  0.869
pza02939
Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family (314 aa)
   
 
  0.848
cl3795_1
DNA binding (458 aa)
     
 
  0.846
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1075 aa)
   
 
  0.837
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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