• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G126552_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G126552_P01" - WD repeat-containing protein VIP3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G126552_P01WD repeat-containing protein VIP3 (322 aa)    
Predicted Functional Partners:
GRMZM2G398825_P02
annotation not available (410 aa)
       
 
  0.982
103646054
annotation not available (1065 aa)
     
 
  0.959
100279518
Protein LEO1-like protein (678 aa)
       
 
  0.933
103631885
annotation not available (661 aa)
       
 
  0.933
103626013
annotation not available (379 aa)
     
 
  0.923
100383871
DExH-box ATP-dependent RNA helicase DExH11 (1373 aa)
     
 
  0.916
spo2
Uncharacterized protein (223 aa)
       
 
  0.903
100273854
Protein PAF1-like protein (214 aa)
       
 
  0.900
GRMZM2G055520_P01
Protein PAF1-like protein (453 aa)
       
 
  0.900
GRMZM2G308884_P01
Uncharacterized protein (1057 aa)
           
  0.859
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]