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STRINGSTRING
sbp12 protein (Zea mays) - STRING interaction network
"sbp12" - SBP transcription factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbp12SBP transcription factor; Uncharacterized protein (332 aa)    
Predicted Functional Partners:
100274315
P-loop containing nucleoside triphosphate hydrolase superfamily protein (661 aa)
           
  0.655
KNOX2
Homeobox protein knotted-1-like 2 ; Belongs to the TALE/KNOX homeobox family (316 aa)
           
  0.587
TIDP2780
LOL1; LOL1 isoform 1; LOL1 isoform 2 (198 aa)
           
  0.585
GRMZM2G094375_P03
Uncharacterized protein (585 aa)
           
  0.548
gras32
Scarecrow-like 6; Uncharacterized protein ; Belongs to the GRAS family (507 aa)
           
  0.548
GRMZM2G147819_P01
P-loop containing nucleoside triphosphate hydrolase superfamily protein (696 aa)
           
  0.493
GRMZM2G309594_P01
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (591 aa)
           
  0.487
dcl101
Dicer-like 101; Belongs to the helicase family. Dicer subfamily (1307 aa)
           
  0.459
GRMZM2G376959_P01
Uncharacterized protein (407 aa)
           
  0.448
GRMZM2G347339_P01
Uncharacterized protein (387 aa)
           
  0.448
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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